Inputs and parameters

Parameters

Run functional and taxonomic annotations Yes
Run MEGAN No
Run annotations with COGs No
Build submission files No
Run blast against your own fasta file No

Annotation

Result table

Metagene Fasta files	Metagene annotation	Diamond fosmid against NR	Diamond fosmid against Uniprot	Diamond ORFs against NR	Diamond ORFs against Uniprot
DNA - PROT	BED	TSV	TSV	TSV	TSV

Result table by fosmid

Sample	Length	GC%	A	T	G	C	Others	Annotated ORFs against Uniprot		Annotated ORFs against NR		Metagene
bioindent1.C1a	38297	44.24	8711	12643	7822	9121	0	5 / 42		18 / 42		Fasta
bioindent2.C1	37094	37.26	11696	11578	7119	6701	0	14 / 41		33 / 41		Fasta

ORF	HSP	Max coverage	Best HSP (max. of %iden * coverage)
ORF	HSP	Max coverage	%iden.	Coverage	Species
ORF1	838	99.1%	41.9	97.3%	Pelotomaculum sp. PtaU1.Bin035
ORF3	7	97.9%	35.1	94.6%	Treponema azotonutricium
ORF4	199	97.3%	28.5	91.4%	Thermodesulfitimonas autotrophica
ORF8	1000	99.6%	45.3	99.2%	Spirochaeta lutea
ORF14	1000	71.2%	47.7	60.5%	Treponema maltophilum
ORF18	1000	99.2%	49.2	96.1%	Bacteroidales bacterium Barb7
ORF21	121	99.1%	65.7	99.1%	Candidatus Termititenax aidoneus
ORF25	17	98.1%	39.9	98.1%	Treponema azotonutricium
ORF27	1	51.6%	36.0	51.6%	Proteobacteria bacterium CAG:495
ORF29	188	77.5%	45.8	77.2%	Treponema primitia
ORF30	803	99.6%	58.5	99.6%	Treponema primitia
ORF31	432	98.6%	62.1	98.6%	Treponema primitia
ORF33	43	97.5%	54.9	97.5%	Treponema primitia
ORF36	1000	99.3%	42.1	98.2%	Clostridium sp. AF18-27
ORF37	2	76.7%	25.6	76.7%	Ruminococcaceae bacterium YRB3002
ORF38	1	89.5%	37.4	89.5%	Gottschalkiaceae bacterium
ORF40	1000	98.0%	31.8	98.0%	uncultured bacterium
ORF41	3	88.4%	37.6	88.4%	Treponema primitia

ORF	HSP	Max coverage	Best HSP (max. of %iden * coverage)
ORF	HSP	Max coverage	%iden.	Coverage	Species
ORF1	1000	99.3%	78.1	82.8%	uncultured bacterium
ORF2	1000	99.5%	54.7	98.1%	Bifidobacterium stellenboschense
ORF3	1000	99.5%	63.6	95.8%	Kineothrix alysoides
ORF4	1000	99.6%	66.3	97.8%	Kineothrix alysoides
ORF5	980	99.5%	34.2	98.0%	Clostridiales bacterium Marseille-P2846
ORF6	900	99.4%	73.9	97.0%	Treponema primitia
ORF7	1000	99.6%	49.4	96.3%	Treponema caldarium
ORF8	3	99.2%	27.1	99.2%	Treponema azotonutricium
ORF9	1000	99.6%	71.9	96.1%	Deltaproteobacteria bacterium
ORF10	1000	99.1%	66.1	99.1%	Treponema primitia
ORF11	58	95.8%	63.4	86.3%	Treponema primitia
ORF13	1000	94.9%	54.9	78.8%	Methanobrevibacter gottschalkii
ORF15	103	81.7%	46.7	78.7%	Methyloversatilis discipulorum
ORF16	9	59.4%	36.4	53.8%	Geobacillus sp. 12AMOR1
ORF18	8	96.2%	33.8	93.9%	Candidatus Micrarchaeota archaeon
ORF19	1	51.0%	34.2	51.0%	Flavobacteriales bacterium CG_4_10_14_0_8_um_filter_32_5
ORF20	95	99.4%	50.5	98.7%	Riemerella anatipestifer
ORF21	13	99.5%	45.2	99.5%	Treponema primitia
ORF23	4	99.4%	36.2	99.4%	Treponema putidum
ORF25	1000	87.7%	52.4	76.1%	Algoriphagus yeomjeoni
ORF27	5	79.5%	40.6	79.5%	Flavobacterium aciduliphilum
ORF29	22	94.6%	66.3	93.5%	Treponema pedis
ORF30	1000	99.6%	83.0	99.3%	Treponema primitia
ORF31	1000	95.4%	73.4	94.4%	Treponema primitia
ORF32	1000	99.5%	75.8	98.1%	Treponema primitia
ORF33	1000	99.6%	82.0	99.6%	Treponema primitia
ORF35	202	99.7%	53.9	99.7%	Desulfosporosinus sp. BG
ORF36	1000	99.9%	54.1	99.8%	Desulfosporosinus sp. BG
ORF37	51	99.5%	67.8	94.5%	Paenibacillus pasadenensis
ORF38	86	99.8%	56.3	99.8%	Desulfosporosinus sp. BG
ORF39	1000	99.6%	70.2	99.2%	uncultured Flavonifractor sp.
ORF40	1000	99.3%	54.6	96.6%	Ruminococcus sp. CAG:724

ORF	HSP	Max coverage	Best HSP (max. of %iden * coverage)
ORF	HSP	Max coverage	%iden.	Coverage	Species
ORF4	4	62.3%	27.5	62.3%	Escherichia coli
ORF8	3	99.2%	42.0	99.2%	Treponema pallidum
ORF14	528	67.5%	39.2	59.8%	Rhodopseudomonas palustris
ORF36	1	81.1%	27.1	81.1%	Staphylococcus xylosus
ORF40	6	61.8%	37.8	57.9%	Clostridium cellulovorans

ORF	HSP	Max coverage	Best HSP (max. of %iden * coverage)
ORF	HSP	Max coverage	%iden.	Coverage	Species
ORF1	12	99.3%	40.1	99.3%	Clostridium thermocellum
ORF2	1	84.7%	27.2	84.7%	Escherichia coli
ORF3	184	99.5%	62.6	94.4%	Clostridium botulinum
ORF4	228	99.6%	60.2	96.7%	Clostridium cellulolyticum
ORF7	65	99.6%	36.4	98.8%	Bradyrhizobium sp
ORF9	1	96.9%	38.2	96.9%	Escherichia coli
ORF10	3	96.6%	32.1	96.6%	Mycobacterium bovis
ORF13	19	81.2%	39.9	81.2%	Bacillus subtilis
ORF30	31	98.6%	37.2	98.2%	Thermodesulfovibrio yellowstonii
ORF31	360	94.4%	52.0	92.6%	Lactobacillus casei
ORF32	217	99.5%	44.7	98.6%	Moorella thermoacetica
ORF33	683	99.6%	56.3	98.5%	Marinobacter hydrocarbonoclasticus
ORF39	1000	99.6%	51.8	98.1%	Bacillus subtilis
ORF40	2	94.4%	31.4	94.4%	Bacillus subtilis

Inputs and parameters

Parameters

Annotation

Result table

Result table by fosmid

Fosmid browser